Bagel2

...the lantibiotic and bacteriocin mining tool

  • Increase font size
  • Default font size
  • Decrease font size
Bagel2: The bacteriocin mining tool

Bagel2 Analysis

BAGEL2

Welcome to the BAGEL2 website, BAGEL2 is a webbased bacteriocin mining tool. If you have genetic data and you want to check if it contains bacteriocin encoding genes you are at the right place. You can either upload a genbank file (max file size = 20 Mb) or select a genbank file from the menu. For instructions go to the manual section. For our ORF calling system click here. Streptococcus pneumoniae ATCC 700669 contains interesting candidates and is a good example for the output BAGEL2 generates. Reference: BAGEL2: mining for bacteriocins in genomic data.

38.107.179.213

  OR select one of the genomes available in the BAGEL2 library :
(Re-)annotate of the genome using:
       No re-annotation
       Glimmer
       Prodigal
       GeneMark [not implemented yet]
       Glimmer and Prodigal

 

Bagel2: Analysis progress view

E-mail Print PDF

no results yet

 

Last Updated on Tuesday, 10 November 2009 11:57
 

MolGen

ruglogo.jpg

molgen3d.gif

Molecular Genetics
University of Groningen
Nijenborgh 7
9747 AG Groningen
the Netherlands

Who's Online

We have 2 guests online