Bagel

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BAGEL3

This section allows to mine for bacteriocins in single or multiple DNA sequences such as (un)finished genomes, scaffold files but also meta-genomics data.

The required input is a folder containing one or multiple DNA files in a FastA format. Also FastA files containing multiple DNA entries are allowed.
No additional information is needed. ORF calling and annotation will be done by BAGEL.

To see a nice output you can select Streptococcus pneumoniae ATCC 700669 from the dropdown menu

Maximum project size for this webserver is 20Mb (packed), but larger projects can be done on request. Alternatively you can download the stand-alone (linux) version of BAGEL.



We also offer to analyze one of the publicly available genomes
This will include the chromosomes cognate plasmids

Last Updated on Thursday, 17 October 2013 13:36